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2009-07-09Removed unused #include <stdio.h> includes left over from whenDon Pellegrino3-3/+0
debugging printfs were in the code.
2009-07-09Added -ggdb flag to facilitate debugging in GDB.Don Pellegrino1-1/+1
2009-07-09Removed a blank line so that running the first paragraph with CTRL-C +Don Pellegrino1-1/+0
CTRL-C in Emacs will finish with a connection established.
2009-07-07Set the AMD Performance Monitor module's directory to be included inDon Pellegrino1-0/+2
GNU Indent processing.
2009-07-07Code to test the use of the AMD Performance Monitor OpenGLDon Pellegrino3-0/+62
Extensions. This test failed as it seems that the non-free Linux driver from AMD does not include an implementation of the extension functions.
2009-07-07Added AMD Performance Monitor objects but commented them out since theDon Pellegrino1-0/+7
non-free drivers for Linux do not appear to include an implementation for these functions.
2009-07-07Ran GNU indent.Don Pellegrino1-12/+15
2009-07-07Ran GNU indent. Added utility function to report back on the use ofDon Pellegrino5-2/+54
graphics memory by ATI cards.
2009-07-07Set the legend to appear as a constant height above the map. SetDon Pellegrino9-30/+59
updating of the map display list to be done only when the contents change.
2009-07-07Moved the map into a single display list in an attempt to improve responsiven...Don Pellegrino2-0/+37
2009-07-07Moved the map into a single display list in an attempt to improveDon Pellegrino1-0/+2
responsiveness.
2009-07-07Added documentation on keyboard command to toggle the display of the legend.Don Pellegrino1-0/+1
2009-07-06Added a density legend to the display. Disabled the depth test soDon Pellegrino11-27/+124
that the alpha blending and point overlays work as expected for an orthographic projection.
2009-07-01Modified to use a display list to render the proteins rather than justDon Pellegrino8-10/+61
points. This feels much slower but looks much better.
2009-07-01Added subdirectory for running r and a script to connect to the DB2Don Pellegrino25-146/+140
backend and retrieve details of the current selection made with the visualization. Added Make target for running GNU indent. Ran indent on all of the code and headers.
2009-06-29Removed exp004base.c since it is an output from the DB2 precompiler from exp0...Don Pellegrino1-359/+0
2009-06-29Fixed termination in the CLEANFILES target.Don Pellegrino1-2/+2
2009-06-29Ignore output from compilation and autotools.Don Pellegrino1-0/+26
2009-06-29Worksheet to test basic integration with Maple.Don Pellegrino1-0/+352
2009-06-18Added build outputs to the ignore list.Don Pellegrino0-0/+0
2009-06-18Added build outputs to the ignore list.Don Pellegrino0-0/+0
2009-06-18Ran a sort on the clean files target.Don Pellegrino1-2/+2
2009-06-18Empty ChangeLog.Don Pellegrino1-0/+0
2009-06-18Added DB2 precompiler output to the ignore list.Don Pellegrino1-49/+301
2009-06-18Added DB2 precompiler output to the ignore list.Don Pellegrino0-0/+0
2009-06-18Added DB2 precompiler output to the ignore list.Don Pellegrino0-0/+0
2009-06-18Implemented zooming.Don Pellegrino1-1/+1
2009-06-18Implemented zooming.Don Pellegrino1-7/+13
2009-06-18Implemented zooming.Don Pellegrino1-5/+20
2009-06-18Implemented zooming.Don Pellegrino1-11/+2
2009-06-18Implemented zooming.Don Pellegrino1-3/+3
2009-06-18Implemented zooming.Don Pellegrino1-21/+59
2009-06-18Implemented zooming.Don Pellegrino4-37/+18
2009-06-18Implemented zooming.Don Pellegrino7-0/+116
2009-06-18Implemented zooming.Don Pellegrino2-0/+37
2009-06-18Implemented zooming.Don Pellegrino1-3/+3
2009-06-18Implemented zooming.Don Pellegrino1-7/+21
2009-06-18Added documentation on new keyboard commands.Don Pellegrino1-0/+3
2009-06-17Added error checking for the database API as well as OpenGL.Don Pellegrino3-1/+100
2009-06-17Create an object to centralize the connection.Don Pellegrino2-0/+22
2009-06-17Renamed selection_to_db to selsave to reduce the filename to eightDon Pellegrino1-41/+0
characters. This is necessary due to the limitation of the package name in DB2 for the binding. It will conflict with selection_from_db otherwise.
2009-06-17Renamed selection_to_db to selsave to reduce the filename to eightDon Pellegrino4-12/+56
characters. This is necessary due to the limitation of the package name in DB2 for the binding. It will conflict with selection_from_db otherwise.
2009-06-16DB2 generated header to match table definition.Don Pellegrino1-0/+13
2009-06-16Modified to use alpha.Don Pellegrino1-1/+2
2009-06-16Added define to make the code more readable.Don Pellegrino1-22/+31
2009-06-16Added zoom command.Don Pellegrino1-0/+13
2009-06-16Added loading of a selection from the database.Don Pellegrino1-1/+43
2009-06-16Added use of alpha. Moved origin to the center to make use ofDon Pellegrino1-19/+30
orthographic projection commands easier.
2009-06-16Added use of alpha.Don Pellegrino1-4/+11
2009-06-16Added initialization of state variables.Don Pellegrino1-0/+2

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