-rw-r--r-- | .gitignore | 5 | ||||
-rw-r--r-- | src/Makefile.am | 10 | ||||
-rw-r--r-- | src/assign_protein_type.c | 135 | ||||
-rw-r--r-- | src/load_influenza_faa.c | 67 | ||||
-rw-r--r-- | src/sequence_data.h | 16 | ||||
-rw-r--r-- | src/sequence_data_init.c | 37 | ||||
-rw-r--r-- | src/sequence_data_init.h | 14 |
7 files changed, 188 insertions, 96 deletions
diff --git a/src/sequence_data.h b/src/sequence_data.h new file mode 100644 index 0000000..fb4ff78 --- a/dev/null +++ b/src/sequence_data.h | |||
@@ -0,0 +1,16 @@ | |||
1 | #ifndef SEQUENCE_DATA_H | ||
2 | #define SEQUENCE_DATA_H | ||
3 | |||
4 | #define SEQUENCE_DATA_FIELD_NUM 4 | ||
5 | |||
6 | #define SEQUENCE_DATA_FIELD_NAMES { "GI", "GB", "Description", "Protein Type" } | ||
7 | |||
8 | typedef struct | ||
9 | { | ||
10 | int gi; | ||
11 | char gb[9]; | ||
12 | char description[196]; | ||
13 | char protein_type[7]; | ||
14 | } sequence_data; | ||
15 | |||
16 | #endif // SEQUENCE_DATA_H | ||