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AC_INIT([exp007], [0.1], [don@drexel.edu])
AM_INIT_AUTOMAKE([-Wall, -Werror, -Wno-portability])
AC_PROG_CC
AM_CONFIG_HEADER([config.h])
AC_CONFIG_FILES([
Makefile
src/Makefile
])
################
# MODULE: HDF5 #
################
AC_SEARCH_LIBS([H5Fcreate],[hdf5],[],
[AC_MSG_ERROR(The HDF5 libraries are needed to build the system.)])
AC_SEARCH_LIBS([H5TBmake_table],[hdf5_hl],[],
[AC_MSG_ERROR(The HDF5 libraries are needed to build the system.)],
[-lhdf5])
AC_CHECK_HEADERS([mpi.h],[],
[AC_MSG_ERROR(The MPI headers are needed to build the system.)])
AC_CHECK_HEADERS([hdf5.h],[],
[AC_MSG_ERROR(The HDF5 headers are needed to build the system.)])
########################
# MODULE: NCBI Toolkit #
########################
# Check for the NCBI ToolBox libraries.
AC_SEARCH_LIBS([log10],[m],[],
[AC_MSG_ERROR(The C Math Library is needed to build the system.)])
AC_SEARCH_LIBS([NlmThreadsAvailable],[ncbi],[],
[AC_MSG_ERROR(The NCBI ToolBox is needed to build the system. Information on this API can be found on-line at http://www.ncbi.nlm.nih.gov/IEB/ToolBox/index.cgi. Debian users can add the package libncbi6-dev to fulfill this dependency.)])
AC_SEARCH_LIBS([SeqAlignNew],[ncbiobj],[],
[AC_MSG_ERROR(The NCBI ToolBox is needed to build the system. Information on this API can be found on-line at http://www.ncbi.nlm.nih.gov/IEB/ToolBox/index.cgi. Debian users can add the package libncbi6-dev to fulfill this dependency.)])
AC_SEARCH_LIBS([Blast_RedoOneMatch],[blastcompadj],[],
[AC_MSG_ERROR(The NCBI ToolBox is needed to build the system. Information on this API can be found on-line at http://www.ncbi.nlm.nih.gov/IEB/ToolBox/index.cgi. Debian users can add the package libncbi6-dev to fulfill this dependency.)])
AC_SEARCH_LIBS([BioseqBlastEngine],[ncbitool],[],
[AC_MSG_ERROR(The NCBI ToolBox is needed to build the system. Information on this API can be found on-line at http://www.ncbi.nlm.nih.gov/IEB/ToolBox/index.cgi. Debian users can add the package libncbi6-dev to fulfill this dependency.)])
AC_OUTPUT
|
